Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm20493-201ENSMUST00000173706 213 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mir6387-201ENSMUST00000184042 108 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mir8111-201ENSMUST00000184463 137 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm27316-201ENSMUST00000184884 277 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm43097-201ENSMUST00000196867 151 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.16□□□□□ -0.46
Snx29Q9D3S3 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snx29Q9D3S3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm22495-201ENSMUST00000104492 126 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Mir1249-201ENSMUST00000116791 98 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm5395-201ENSMUST00000121650 915 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm7627-201ENSMUST00000183205 999 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm6677-201ENSMUST00000195100 441 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm40414-201ENSMUST00000197608 481 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm25514-201ENSMUST00000083860 135 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx29Q9D3S3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Snx29Q9D3S3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gm23675-201ENSMUST00000157311 125 ntBASIC12.14□□□□□ -0.47
Snx29Q9D3S3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.14□□□□□ -0.47
Snx29Q9D3S3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms