Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm10807-201ENSMUST00000177134 795 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm18351-201ENSMUST00000188646 883 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm18377-201ENSMUST00000215141 607 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm9257-201ENSMUST00000221254 232 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.23□□□□□ -0.77
Trim13Q9CYB0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim13Q9CYB0 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm17376-201ENSMUST00000166016 84 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm28686-201ENSMUST00000187404 609 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm37597-201ENSMUST00000191853 382 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 AY036118-201ENSMUST00000200021 923 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm45224-201ENSMUST00000208203 414 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm26448-201ENSMUST00000082446 203 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms