Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm9791-201ENSMUST00000060997 447 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm14165-201ENSMUST00000121456 952 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Mir6953-201ENSMUST00000184745 68 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm2448-201ENSMUST00000207080 559 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm10580-201ENSMUST00000097985 396 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm10582-201ENSMUST00000097987 396 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm10583-201ENSMUST00000097988 396 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 AC107763.1-201ENSMUST00000226082 1365 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm24078-201ENSMUST00000158184 103 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm24328-201ENSMUST00000175104 67 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Prpf8Q99PV0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Prpf8Q99PV0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Rgr-203ENSMUST00000225070 4704 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Snord23-201ENSMUST00000116828 109 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm13284-201ENSMUST00000121020 547 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm12453-201ENSMUST00000121981 331 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm18014-201ENSMUST00000183369 817 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Gm43966-201ENSMUST00000203301 612 ntBASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Prpf8Q99PV0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms