Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Gm15432-201ENSMUST00000121106 195 ntBASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm37301-201ENSMUST00000195412 568 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim11Q99PQ2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm13422-201ENSMUST00000118834 504 ntBASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Mir5120-201ENSMUST00000175020 78 ntBASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm37905-201ENSMUST00000195310 341 ntBASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim11Q99PQ2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms