Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm28450-201ENSMUST00000187349 638 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm44506-201ENSMUST00000206278 965 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm45186-201ENSMUST00000206874 478 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm25007-201ENSMUST00000083808 133 ntBASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkd1Q99MH6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm17825-201ENSMUST00000206836 794 ntBASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkd1Q99MH6 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkd1Q99MH6 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkd1Q99MH6 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Nkd1Q99MH6 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms