Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm13226-201ENSMUST00000117838 404 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Tram1Q91V04 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm24990-201ENSMUST00000157406 323 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm31256-201ENSMUST00000194705 506 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.48□□□□□ -0.89
Tram1Q91V04 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm8815-201ENSMUST00000173809 620 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm38151-201ENSMUST00000195085 289 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm43058-201ENSMUST00000197645 625 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm6266-201ENSMUST00000203844 806 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Tram1Q91V04 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Tram1Q91V04 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.47□□□□□ -0.89
Tram1Q91V04 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tram1Q91V04 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Tram1Q91V04 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Tram1Q91V04 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Tram1Q91V04 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms