Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm14592-201ENSMUST00000117201 560 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm15615-201ENSMUST00000118876 198 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm14277-201ENSMUST00000121195 360 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm37981-201ENSMUST00000194280 535 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm10020-201ENSMUST00000081993 612 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Olfr584-201ENSMUST00000098210 964 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm12997-201ENSMUST00000120207 640 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm27552-201ENSMUST00000183351 62 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm27844-201ENSMUST00000183613 62 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm28746-201ENSMUST00000187453 380 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm5363-201ENSMUST00000211927 938 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm19208-201ENSMUST00000213861 912 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim60Q8VI40 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim60Q8VI40 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.42□□□□□ -0.58
Trim60Q8VI40 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms