Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm12622-201ENSMUST00000177975 382 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm12627-201ENSMUST00000178412 382 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm12625-201ENSMUST00000179122 382 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm12614-201ENSMUST00000179586 382 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm12613-201ENSMUST00000180323 382 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm44323-201ENSMUST00000198689 129 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm44980-201ENSMUST00000205826 314 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trim29Q8R2Q0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Mir1943-201ENSMUST00000158276 73 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm7467-201ENSMUST00000185173 652 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm29787-201ENSMUST00000222129 849 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim29Q8R2Q0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms