Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm10263-201ENSMUST00000085163 300 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm4917-201ENSMUST00000121452 650 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm17877-201ENSMUST00000192578 814 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm5599-201ENSMUST00000209602 788 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Snora73b-201ENSMUST00000083419 205 ntBASIC10.42□□□□□ -0.74
Clrn1Q8K445 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.42□□□□□ -0.74
Clrn1Q8K445 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm15197-201ENSMUST00000120526 478 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm1848-201ENSMUST00000120711 789 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm43163-201ENSMUST00000196571 442 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms