Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm37613-201ENSMUST00000195677 3580 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm37031-201ENSMUST00000195487 2530 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm19353-201ENSMUST00000184561 445 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm18056-201ENSMUST00000207670 568 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm18061-201ENSMUST00000208350 562 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm18063-201ENSMUST00000208529 568 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm18052-201ENSMUST00000208750 559 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm45041-201ENSMUST00000207366 3108 ntBASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cchcr1Q8K2I2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm7985-201ENSMUST00000183329 981 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Platr10-202ENSMUST00000191479 818 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm17831-201ENSMUST00000205579 900 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 AC154461.3-201ENSMUST00000224831 573 ntBASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cchcr1Q8K2I2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 AC154171.2-201ENSMUST00000225219 2652 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm9062-201ENSMUST00000117712 727 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm13422-201ENSMUST00000118834 504 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm25226-201ENSMUST00000158198 123 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 390 ms