Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm8062-201ENSMUST00000139696 444 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm8459-201ENSMUST00000162504 760 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Mir7677-201ENSMUST00000184226 67 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm27441-201ENSMUST00000185000 105 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm17812-201ENSMUST00000204935 318 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm45224-201ENSMUST00000208203 414 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm29615-201ENSMUST00000185371 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28224-201ENSMUST00000186078 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm29001-201ENSMUST00000186177 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28292-201ENSMUST00000186593 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28101-201ENSMUST00000187608 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm29076-201ENSMUST00000187689 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28302-201ENSMUST00000187931 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28646-201ENSMUST00000188220 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28205-201ENSMUST00000189177 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm29032-201ENSMUST00000189797 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm28695-201ENSMUST00000190300 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm37448-201ENSMUST00000192795 697 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 AA914427-201ENSMUST00000193194 1166 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm18038-201ENSMUST00000197900 485 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccdc28bQ8CEG5 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Btrc-206ENSMUST00000224102 3037 ntBASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccdc28bQ8CEG5 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms