Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gm23272-201ENSMUST00000104053 129 ntBASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gm11956-201ENSMUST00000119525 512 ntBASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gm37301-201ENSMUST00000195412 568 ntBASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc38Q8CDN8 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc38Q8CDN8 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc38Q8CDN8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc38Q8CDN8 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Mir7051-201ENSMUST00000184167 73 ntBASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm23105-201ENSMUST00000083719 134 ntBASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc38Q8CDN8 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms