Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Snord17-201ENSMUST00000104526 238 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm13916-201ENSMUST00000117368 628 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm14263-201ENSMUST00000117955 746 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm13408-201ENSMUST00000119822 798 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm13935-201ENSMUST00000121859 798 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm10774-201ENSMUST00000188689 204 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm43947-201ENSMUST00000203019 959 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc87Q8CDL9 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm15566-201ENSMUST00000121130 590 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm9211-201ENSMUST00000182882 975 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm38321-201ENSMUST00000195053 235 ntBASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc87Q8CDL9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc87Q8CDL9 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms