Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm5668-201ENSMUST00000220897 436 ntBASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 AC187103.1-202ENSMUST00000223904 1536 ntBASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.83■□□□□ 0.28
Pabpn1Q8CCS6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm14592-201ENSMUST00000117201 560 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm13864-201ENSMUST00000119745 785 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm17828-201ENSMUST00000183380 799 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm37678-201ENSMUST00000192908 1146 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm7047-201ENSMUST00000196224 1063 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm7384-201ENSMUST00000203682 530 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 1700013G24Rik-201ENSMUST00000048893 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 AC155245.1-201ENSMUST00000222266 1804 ntBASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpn1Q8CCS6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gm7672-201ENSMUST00000180915 872 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gm43066-201ENSMUST00000199589 1260 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gnpnat1-202ENSMUST00000226276 710 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 AC242269.1-201ENSMUST00000227020 741 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pabpn1Q8CCS6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Gm37264-201ENSMUST00000194916 2192 ntBASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Mipep-ps-201ENSMUST00000177439 291 ntBASIC16.8■□□□□ 0.28
Pabpn1Q8CCS6 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms