Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm25562-201ENSMUST00000104608 133 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm25830-201ENSMUST00000158923 132 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm42660-201ENSMUST00000197733 947 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm2594-201ENSMUST00000214774 742 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Capsl-202ENSMUST00000226688 739 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf31Q8CCF0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm44216-201ENSMUST00000203942 157 ntBASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf31Q8CCF0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf31Q8CCF0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf31Q8CCF0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf31Q8CCF0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 291.4 ms