Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps53Q8CCB4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps53Q8CCB4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps53Q8CCB4 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps53Q8CCB4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps53Q8CCB4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Gm12990-201ENSMUST00000120372 468 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Gm13022-201ENSMUST00000121181 285 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Gm9135-201ENSMUST00000182963 990 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.9□□□□□ -0.34
Vps53Q8CCB4 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps53Q8CCB4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vps53Q8CCB4 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps53Q8CCB4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm11244-201ENSMUST00000121243 237 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm12030-201ENSMUST00000121917 223 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms