Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm6545-201ENSMUST00000217186 1786 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm12742-201ENSMUST00000117326 410 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm14899-201ENSMUST00000118673 548 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm26393-201ENSMUST00000157625 129 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm38181-201ENSMUST00000181357 720 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm26954-202ENSMUST00000182753 762 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm21877-201ENSMUST00000185640 694 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm18775-201ENSMUST00000190763 586 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm37424-201ENSMUST00000191727 561 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm19057-201ENSMUST00000194329 1197 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm9236-201ENSMUST00000196892 587 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm43013-201ENSMUST00000198216 247 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm40466-201ENSMUST00000212174 422 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm3565-201ENSMUST00000222670 609 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trim35Q8C006 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.81□□□□□ -0.36
Trim35Q8C006 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim35Q8C006 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms