Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm10238-201ENSMUST00000089689 408 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ddx55Q6ZPL9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.58□□□□□ -0.39
Ddx55Q6ZPL9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ddx55Q6ZPL9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ddx55Q6ZPL9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ddx55Q6ZPL9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm13857-201ENSMUST00000139645 173 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm16228-201ENSMUST00000162286 809 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm40414-201ENSMUST00000197608 481 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm9619-201ENSMUST00000211587 762 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ddx55Q6ZPL9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm13286-201ENSMUST00000117750 537 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm13426-201ENSMUST00000117887 795 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm9574-201ENSMUST00000173127 845 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm43726-201ENSMUST00000199110 775 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 475.8 ms