Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm24294-201ENSMUST00000158295 277 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm7242-201ENSMUST00000221134 705 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm23255-201ENSMUST00000102244 110 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm8216-201ENSMUST00000117232 601 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm24140-201ENSMUST00000122773 326 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm9409-201ENSMUST00000197017 316 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm45308-201ENSMUST00000210610 415 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup98Q6PFD9 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm27833-201ENSMUST00000184285 124 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm38321-201ENSMUST00000195053 235 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm43752-201ENSMUST00000198475 697 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup98Q6PFD9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm11473-201ENSMUST00000118980 359 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms