Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm42979-201ENSMUST00000196287 2228 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm12957-201ENSMUST00000117835 377 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm11511-201ENSMUST00000118146 540 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm14726-201ENSMUST00000120623 896 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm17420-201ENSMUST00000164753 153 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm27572-201ENSMUST00000183702 255 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm19287-201ENSMUST00000203190 358 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm21769-201ENSMUST00000211922 111 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm18935-201ENSMUST00000212692 664 ntBASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf220Q6PDX6 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm23270-201ENSMUST00000104055 131 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm11930-201ENSMUST00000117788 190 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm6963-201ENSMUST00000147879 379 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm31256-201ENSMUST00000194705 506 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm8956-201ENSMUST00000203939 825 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Gm45598-202ENSMUST00000210719 986 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms