Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm6682-201ENSMUST00000169666 1346 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm11686-201ENSMUST00000122397 333 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm45454-201ENSMUST00000211484 455 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
VcanQ62059 Olfr1425-201ENSMUST00000087828 939 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
VcanQ62059 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.04□□□□□ -0.8
VcanQ62059 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.04□□□□□ -0.8
VcanQ62059 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
VcanQ62059 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.04□□□□□ -0.8
VcanQ62059 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.04□□□□□ -0.8
VcanQ62059 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Gm12338-201ENSMUST00000122170 192 ntBASIC10.04□□□□□ -0.8
VcanQ62059 Gm24346-201ENSMUST00000158712 194 ntBASIC10.04□□□□□ -0.8
VcanQ62059 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC10.04□□□□□ -0.8
VcanQ62059 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC10.04□□□□□ -0.8
VcanQ62059 AC124686.1-201ENSMUST00000225546 522 ntBASIC10.04□□□□□ -0.8
VcanQ62059 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
VcanQ62059 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
VcanQ62059 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
VcanQ62059 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.04□□□□□ -0.8
VcanQ62059 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Gm12619-201ENSMUST00000117369 385 ntBASIC10.04□□□□□ -0.8
VcanQ62059 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
VcanQ62059 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Mir7115-201ENSMUST00000184275 64 ntBASIC10.04□□□□□ -0.8
VcanQ62059 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
VcanQ62059 AC125487.1-201ENSMUST00000217888 1300 ntBASIC10.04□□□□□ -0.8
VcanQ62059 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VcanQ62059 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm7158-201ENSMUST00000120079 903 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm22481-201ENSMUST00000122562 192 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
VcanQ62059 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC10.03□□□□□ -0.8
VcanQ62059 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.03□□□□□ -0.8
VcanQ62059 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 AC116390.1-201ENSMUST00000227975 670 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Gm15383-201ENSMUST00000121889 1443 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms