Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Mir877-201ENSMUST00000104738 85 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Gm37246-201ENSMUST00000192665 835 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Gm37981-201ENSMUST00000194280 535 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.19□□□□□ -0.46
Ift88Q61371 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ift88Q61371 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ift88Q61371 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ift88Q61371 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.19□□□□□ -0.46
Ift88Q61371 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.19□□□□□ -0.46
Ift88Q61371 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ift88Q61371 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ift88Q61371 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Spata33-207ENSMUST00000212760 4074 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.18□□□□□ -0.46
Ift88Q61371 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.18□□□□□ -0.46
Ift88Q61371 Gm14277-201ENSMUST00000121195 360 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Ift88Q61371 Mir7051-201ENSMUST00000184167 73 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Gm28450-201ENSMUST00000187349 638 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Gm37835-201ENSMUST00000193305 361 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.18□□□□□ -0.46
Ift88Q61371 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms