Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm14219-201ENSMUST00000120414 288 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm13445-201ENSMUST00000121664 307 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm11675-201ENSMUST00000121873 832 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm12628-201ENSMUST00000122193 382 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Mir1905-201ENSMUST00000122779 82 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm24074-201ENSMUST00000158178 260 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm42660-201ENSMUST00000197733 947 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm7880-201ENSMUST00000203748 871 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm2594-201ENSMUST00000214774 742 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm11560-201ENSMUST00000117567 948 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm25830-201ENSMUST00000158923 132 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm17221-201ENSMUST00000163909 481 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm17073-201ENSMUST00000168069 556 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm9487-201ENSMUST00000216600 472 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps54Q5SPW0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms