Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm8955-201ENSMUST00000182945 1008 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm45363-201ENSMUST00000210196 1294 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 S100a10-201ENSMUST00000045756 685 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm14504-201ENSMUST00000119391 1497 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm10651-201ENSMUST00000118212 609 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm9630-201ENSMUST00000178304 885 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm6054-201ENSMUST00000078052 378 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 1700031F10Rik-202ENSMUST00000156018 609 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm7337-201ENSMUST00000180954 1125 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm38114-201ENSMUST00000191877 1232 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 AC138329.2-201ENSMUST00000225579 1842 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm6783-201ENSMUST00000120916 1437 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm11517-201ENSMUST00000119491 387 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Vmn1r-ps147-201ENSMUST00000177028 513 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm20898-201ENSMUST00000185598 693 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm28167-201ENSMUST00000187644 550 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm8992-201ENSMUST00000204463 502 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm15928-201ENSMUST00000122455 280 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm32914-201ENSMUST00000203815 2228 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Mir8110-201ENSMUST00000183771 97 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms