Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm6216-201ENSMUST00000182390 687 ntBASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm25394-201ENSMUST00000157338 133 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm43106-201ENSMUST00000199485 637 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm5738-201ENSMUST00000206016 779 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chrna5Q2MKA5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 Mir598-201ENSMUST00000102094 79 ntBASIC13.09□□□□□ -0.31
Chrna5Q2MKA5 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms