Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a2Q07643 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a2Q07643 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a2Q07643 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a2Q07643 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a2Q07643 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm11996-201ENSMUST00000117538 915 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm13039-201ENSMUST00000118638 794 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm13981-201ENSMUST00000122360 447 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm22119-201ENSMUST00000175594 99 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm26272-201ENSMUST00000179241 132 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Mir6387-201ENSMUST00000184042 108 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm18801-201ENSMUST00000186616 536 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm40414-201ENSMUST00000197608 481 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Gm18010-201ENSMUST00000203553 202 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.96□□□□□ -0.49
Col9a2Q07643 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.96□□□□□ -0.49
Col9a2Q07643 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a2Q07643 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.96□□□□□ -0.5
Col9a2Q07643 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col9a2Q07643 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a2Q07643 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a2Q07643 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col9a2Q07643 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.96□□□□□ -0.5
Col9a2Q07643 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a2Q07643 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a2Q07643 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.96□□□□□ -0.5
Col9a2Q07643 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm14234-201ENSMUST00000119539 845 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm17214-201ENSMUST00000164501 541 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm7904-201ENSMUST00000217049 465 ntBASIC11.95□□□□□ -0.5
Col9a2Q07643 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a2Q07643 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.95□□□□□ -0.5
Col9a2Q07643 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms