Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.44□□□□□ -0.9
Smn1P97801 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.44□□□□□ -0.9
Smn1P97801 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smn1P97801 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Smn1P97801 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.44□□□□□ -0.9
Smn1P97801 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.44□□□□□ -0.9
Smn1P97801 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smn1P97801 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.44□□□□□ -0.9
Smn1P97801 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Smn1P97801 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.43□□□□□ -0.9
Smn1P97801 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.43□□□□□ -0.9
Smn1P97801 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Gm8111-201ENSMUST00000117659 987 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm25881-201ENSMUST00000157783 103 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Gm24074-201ENSMUST00000158178 260 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm16505-201ENSMUST00000179981 232 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.43□□□□□ -0.9
Smn1P97801 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm38321-201ENSMUST00000195053 235 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Gm7003-201ENSMUST00000195089 312 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Gm19208-201ENSMUST00000213861 912 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.43□□□□□ -0.9
Smn1P97801 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Smn1P97801 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smn1P97801 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.43□□□□□ -0.9
Smn1P97801 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smn1P97801 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smn1P97801 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.42□□□□□ -0.9
Smn1P97801 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Gm14724-201ENSMUST00000118400 537 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm11941-201ENSMUST00000119904 610 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.42□□□□□ -0.9
Smn1P97801 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Gm25890-201ENSMUST00000177643 165 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm22614-201ENSMUST00000178300 165 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm43058-201ENSMUST00000197645 625 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm2965-201ENSMUST00000198365 343 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm44044-201ENSMUST00000205178 1089 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm17825-201ENSMUST00000206836 794 ntBASIC9.42□□□□□ -0.9
Smn1P97801 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.42□□□□□ -0.9
Smn1P97801 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smn1P97801 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms