Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Mir1893-201ENSMUST00000122565 83 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Mir1941-201ENSMUST00000157834 83 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm45893-201ENSMUST00000211899 247 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 AC116797.2-202ENSMUST00000223587 1017 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcc1P97496 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcc1P97496 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.87□□□□□ -0.19
Smarcc1P97496 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm23132-201ENSMUST00000104254 132 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm5976-201ENSMUST00000180794 996 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Mir8111-201ENSMUST00000184463 137 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm37688-201ENSMUST00000195195 465 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm38349-201ENSMUST00000195732 462 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm42689-201ENSMUST00000202403 404 ntBASIC13.86□□□□□ -0.19
Smarcc1P97496 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Btrc-209ENSMUST00000224478 2194 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms