Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm5244-202ENSMUST00000189517 743 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm6439-201ENSMUST00000199849 862 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm45527-201ENSMUST00000211052 774 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm18042-201ENSMUST00000219887 790 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm3791-201ENSMUST00000220790 768 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm5697-201ENSMUST00000122295 2482 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Pck2-205ENSMUST00000226352 2784 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm12397-201ENSMUST00000117674 615 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm15707-201ENSMUST00000118804 996 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm16441-201ENSMUST00000138176 924 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm6038-201ENSMUST00000154310 948 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Mir6359-201ENSMUST00000183668 81 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm2345-201ENSMUST00000193451 589 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm5278-201ENSMUST00000055957 552 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.86□□□□□ -0.19
Nkx2-3P97334 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-3P97334 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm37785-201ENSMUST00000195783 2408 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm24933-201ENSMUST00000103762 110 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm23252-201ENSMUST00000103776 110 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm23595-201ENSMUST00000104306 130 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm22495-201ENSMUST00000104492 126 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm26443-201ENSMUST00000179610 110 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm19080-201ENSMUST00000196082 550 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms