Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox1P53783 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox1P53783 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.36□□□□□ -0.59
Sox1P53783 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sox1P53783 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Sox1P53783 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sox1P53783 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Sox1P53783 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Sox1P53783 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm13071-201ENSMUST00000122237 376 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Mir8104-201ENSMUST00000185165 101 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Gm18299-201ENSMUST00000192026 636 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Gm5845-201ENSMUST00000195812 796 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Gm42821-201ENSMUST00000199771 489 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sox1P53783 Gm25514-201ENSMUST00000083860 135 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox1P53783 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox1P53783 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.35□□□□□ -0.59
Sox1P53783 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Gm16480-201ENSMUST00000120439 832 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox1P53783 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Gm12499-201ENSMUST00000121961 546 ntBASIC11.34□□□□□ -0.59
Sox1P53783 n-R5s154-201ENSMUST00000122513 108 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Gm13898-201ENSMUST00000141865 610 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox1P53783 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Sox1P53783 Gm26532-201ENSMUST00000180630 690 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms