Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pdx1P52946 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.91□□□□□ -0.66
Pdx1P52946 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdx1P52946 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Gm13117-201ENSMUST00000120894 691 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Gm13182-201ENSMUST00000122241 312 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdx1P52946 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gm15744-201ENSMUST00000161734 213 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdx1P52946 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdx1P52946 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pdx1P52946 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pdx1P52946 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Pdx1P52946 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.91□□□□□ -0.66
Pdx1P52946 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdx1P52946 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pdx1P52946 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pdx1P52946 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pdx1P52946 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.9□□□□□ -0.66
Pdx1P52946 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pdx1P52946 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 325.1 ms