Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Shmt1P50431 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shmt1P50431 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.68□□□□□ -0.54
Shmt1P50431 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.68□□□□□ -0.54
Shmt1P50431 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Gm5302-201ENSMUST00000202130 796 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 Gm35713-201ENSMUST00000210516 199 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Gm8255-201ENSMUST00000218693 305 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shmt1P50431 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.68□□□□□ -0.54
Shmt1P50431 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shmt1P50431 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm25053-201ENSMUST00000103982 133 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm25922-201ENSMUST00000104281 130 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shmt1P50431 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm11380-201ENSMUST00000118067 560 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm24248-201ENSMUST00000157321 322 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm24679-201ENSMUST00000158762 111 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm19587-201ENSMUST00000191395 545 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Platr10-202ENSMUST00000191479 818 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm37365-201ENSMUST00000193109 409 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm25053-202ENSMUST00000199731 132 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Mir483-201ENSMUST00000093631 73 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.67□□□□□ -0.54
Shmt1P50431 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt1P50431 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt1P50431 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms