Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm5342-201ENSMUST00000181982 1003 ntBASIC10□□□□□ -0.81
Rfx3P48381 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Gm9353-201ENSMUST00000200472 604 ntBASIC10□□□□□ -0.81
Rfx3P48381 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 AC122891.1-201ENSMUST00000218671 268 ntBASIC10□□□□□ -0.81
Rfx3P48381 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10□□□□□ -0.81
Rfx3P48381 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Nudt13-207ENSMUST00000224311 1574 ntBASIC10□□□□□ -0.81
Rfx3P48381 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10□□□□□ -0.81
Rfx3P48381 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Rfx3P48381 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10□□□□□ -0.81
Rfx3P48381 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm22920-201ENSMUST00000102175 109 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Rfx3P48381 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm15595-201ENSMUST00000120840 961 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm15329-201ENSMUST00000121408 155 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Olfml3-204ENSMUST00000169286 874 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.99□□□□□ -0.81
Rfx3P48381 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm7504-201ENSMUST00000201449 424 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm43852-201ENSMUST00000202098 917 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Rfx3P48381 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.99□□□□□ -0.81
Rfx3P48381 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.99□□□□□ -0.81
Rfx3P48381 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Rfx3P48381 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rfx3P48381 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rfx3P48381 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms