Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Nedd8P29595 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm15617-201ENSMUST00000118973 771 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.11□□□□□ -0.79
Nedd8P29595 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.11□□□□□ -0.79
Nedd8P29595 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.11□□□□□ -0.79
Nedd8P29595 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm6722-201ENSMUST00000221586 390 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm5455-201ENSMUST00000058710 715 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 Gm5705-201ENSMUST00000066241 711 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.1□□□□□ -0.79
Nedd8P29595 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nedd8P29595 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.1□□□□□ -0.79
Nedd8P29595 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.1□□□□□ -0.79
Nedd8P29595 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm5745-201ENSMUST00000183748 313 ntBASIC10.1□□□□□ -0.79
Nedd8P29595 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.1□□□□□ -0.79
Nedd8P29595 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.1□□□□□ -0.79
Nedd8P29595 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC10.1□□□□□ -0.79
Nedd8P29595 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nedd8P29595 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Nedd8P29595 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.09□□□□□ -0.79
Nedd8P29595 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms