Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm17221-201ENSMUST00000163909 481 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Gm17073-201ENSMUST00000168069 556 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Gm26670-202ENSMUST00000226862 340 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm11619-201ENSMUST00000117474 237 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm14213-201ENSMUST00000119778 768 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.4□□□□□ -0.58
Nfkb1P25799 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm26989-201ENSMUST00000182608 749 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Mir7035-201ENSMUST00000184713 82 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.4□□□□□ -0.58
Nfkb1P25799 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nfkb1P25799 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nfkb1P25799 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nfkb1P25799 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.4□□□□□ -0.59
Nfkb1P25799 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nfkb1P25799 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nfkb1P25799 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nfkb1P25799 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm14165-201ENSMUST00000121456 952 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm5700-201ENSMUST00000191483 989 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms