Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm25148-201ENSMUST00000104611 123 ntBASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm16219-201ENSMUST00000120096 274 ntBASIC12.05□□□□□ -0.48
Chmp6P0C0A3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.05□□□□□ -0.48
Chmp6P0C0A3 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.05□□□□□ -0.48
Chmp6P0C0A3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp6P0C0A3 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms