Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 AC166836.1-201ENSMUST00000219933 1795 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm13732-201ENSMUST00000117753 535 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm18356-201ENSMUST00000185677 623 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm3551-201ENSMUST00000190750 664 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm37981-201ENSMUST00000194280 535 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Hoxd3P09027 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 AC110816.1-201ENSMUST00000218559 980 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 AC132881.1-201ENSMUST00000223780 1062 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 AC134869.4-202ENSMUST00000224350 837 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 AC107711.3-201ENSMUST00000228939 1035 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm6430-201ENSMUST00000054664 1248 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.95□□□□□ -0.98
Hoxd3P09027 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hoxd3P09027 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxd3P09027 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm43727-201ENSMUST00000198021 2647 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm26143-201ENSMUST00000104480 108 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms