Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
P04224 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.68□□□□□ -0.86
P04224 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.68□□□□□ -0.86
P04224 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P04224 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.68□□□□□ -0.86
P04224 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P04224 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.68□□□□□ -0.86
P04224 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.68□□□□□ -0.86
P04224 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P04224 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.68□□□□□ -0.86
P04224 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P04224 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P04224 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm6621-201ENSMUST00000193251 772 ntBASIC9.68□□□□□ -0.86
P04224 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.68□□□□□ -0.86
P04224 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.68□□□□□ -0.86
P04224 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.68□□□□□ -0.86
P04224 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P04224 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
P04224 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04224 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.68□□□□□ -0.86
P04224 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.68□□□□□ -0.86
P04224 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P04224 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC9.67□□□□□ -0.86
P04224 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.67□□□□□ -0.86
P04224 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.67□□□□□ -0.86
P04224 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.67□□□□□ -0.86
P04224 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
P04224 Gm12742-201ENSMUST00000117326 410 ntBASIC9.67□□□□□ -0.86
P04224 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.67□□□□□ -0.86
P04224 Gm14726-201ENSMUST00000120623 896 ntBASIC9.67□□□□□ -0.86
P04224 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.67□□□□□ -0.86
P04224 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.67□□□□□ -0.86
P04224 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04224 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms