Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Gm37458-201ENSMUST00000194055 410 ntBASIC10.33□□□□□ -0.76
IghmP01872 Gm37826-201ENSMUST00000195329 322 ntBASIC10.33□□□□□ -0.76
IghmP01872 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Gm5599-201ENSMUST00000209602 788 ntBASIC10.33□□□□□ -0.76
IghmP01872 Mt1-202ENSMUST00000211807 1085 ntBASIC10.33□□□□□ -0.76
IghmP01872 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.33□□□□□ -0.76
IghmP01872 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.33□□□□□ -0.76
IghmP01872 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.33□□□□□ -0.76
IghmP01872 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.33□□□□□ -0.76
IghmP01872 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IghmP01872 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IghmP01872 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.32□□□□□ -0.76
IghmP01872 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
IghmP01872 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.32□□□□□ -0.76
IghmP01872 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gm25076-201ENSMUST00000104098 132 ntBASIC10.32□□□□□ -0.76
IghmP01872 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
IghmP01872 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.32□□□□□ -0.76
IghmP01872 Gm13284-201ENSMUST00000121020 547 ntBASIC10.32□□□□□ -0.76
IghmP01872 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.32□□□□□ -0.76
IghmP01872 Gm18042-201ENSMUST00000219887 790 ntBASIC10.32□□□□□ -0.76
IghmP01872 Spcs1-203ENSMUST00000226374 592 ntBASIC10.32□□□□□ -0.76
IghmP01872 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.32□□□□□ -0.76
IghmP01872 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.32□□□□□ -0.76
IghmP01872 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
IghmP01872 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
IghmP01872 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.32□□□□□ -0.76
IghmP01872 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.32□□□□□ -0.76
IghmP01872 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.32□□□□□ -0.76
IghmP01872 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.32□□□□□ -0.76
IghmP01872 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.32□□□□□ -0.76
IghmP01872 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IghmP01872 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
IghmP01872 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
IghmP01872 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
IghmP01872 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
IghmP01872 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms