Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm44716-201ENSMUST00000209007 710 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm45110-201ENSMUST00000205704 1402 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm43761-201ENSMUST00000202132 991 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm18065-201ENSMUST00000221395 526 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm28671-201ENSMUST00000187036 692 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 AC114585.2-201ENSMUST00000227693 486 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm9790-201ENSMUST00000054148 288 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp9yF8VPU6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC8.81□□□□□ -1
Usp9yF8VPU6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usp9yF8VPU6 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms