Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm14892-201ENSMUST00000117636 267 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm26134-201ENSMUST00000178484 110 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm7719-201ENSMUST00000182374 975 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Mir8093-201ENSMUST00000185043 137 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm5870-201ENSMUST00000196461 282 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm8342-201ENSMUST00000209839 757 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm39288-201ENSMUST00000210554 446 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Usf3B2RUQ2 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm15620-201ENSMUST00000122949 270 ntBASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm23675-201ENSMUST00000157311 125 ntBASIC9.26□□□□□ -0.93
Usf3B2RUQ2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.26□□□□□ -0.93
Usf3B2RUQ2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usf3B2RUQ2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms