Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm8019-201ENSMUST00000119317 587 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm37207-201ENSMUST00000194284 296 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Wbp1-209ENSMUST00000205023 716 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm8557-201ENSMUST00000220777 475 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm24954-201ENSMUST00000178831 110 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm12948-201ENSMUST00000119406 682 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm11544-201ENSMUST00000120215 382 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm43854-201ENSMUST00000200418 394 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm8796-201ENSMUST00000219122 936 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn3aA2ASI5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm13857-201ENSMUST00000139645 173 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm3527-201ENSMUST00000198905 460 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm10238-201ENSMUST00000089689 408 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Rubie-203ENSMUST00000227803 2430 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.22□□□□□ -0.45
Scn3aA2ASI5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms