Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12616-201ENSMUST00000118594 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm16165-201ENSMUST00000160140 795 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12624-201ENSMUST00000177615 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12621-201ENSMUST00000177760 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12615-201ENSMUST00000177970 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12622-201ENSMUST00000177975 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12627-201ENSMUST00000178412 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12625-201ENSMUST00000179122 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12614-201ENSMUST00000179586 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm12613-201ENSMUST00000180323 382 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Mir7076-201ENSMUST00000183519 74 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm43947-201ENSMUST00000203019 959 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm18561-201ENSMUST00000206027 804 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm18042-201ENSMUST00000219887 790 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf6Q9DBU5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm15131-201ENSMUST00000119124 595 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm12029-201ENSMUST00000120073 832 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm25554-201ENSMUST00000158075 113 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm6407-201ENSMUST00000176468 549 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm17877-201ENSMUST00000192578 814 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Id2-203ENSMUST00000222667 958 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf6Q9DBU5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf6Q9DBU5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms