Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm13937-201ENSMUST00000121000 988 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm22138-201ENSMUST00000158748 128 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm8531-201ENSMUST00000188319 893 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Gm42867-201ENSMUST00000202995 469 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp2aQ9DB34 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Mir1956-201ENSMUST00000157748 65 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm44551-201ENSMUST00000208804 171 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms