Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Snord17-201ENSMUST00000104526 238 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm14058-201ENSMUST00000116082 735 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm8111-201ENSMUST00000117659 987 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm2260-201ENSMUST00000184965 657 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkd1Q99MH6 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm13035-201ENSMUST00000117496 342 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm13809-201ENSMUST00000117921 597 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm43058-201ENSMUST00000197645 625 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkd1Q99MH6 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms