Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm6238-201ENSMUST00000120999 465 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm13857-201ENSMUST00000139645 173 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm17782-201ENSMUST00000174345 880 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm27826-201ENSMUST00000175282 255 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm27833-201ENSMUST00000184285 124 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm38233-201ENSMUST00000194259 807 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 AC155300.1-201ENSMUST00000219134 480 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm22341-201ENSMUST00000083775 129 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm10238-201ENSMUST00000089689 408 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.68□□□□□ -0.22
RtcbQ99LF4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.67□□□□□ -0.22
RtcbQ99LF4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gm13624-201ENSMUST00000120263 462 ntBASIC13.67□□□□□ -0.22
RtcbQ99LF4 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.67□□□□□ -0.22
RtcbQ99LF4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RtcbQ99LF4 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm6754-201ENSMUST00000117124 913 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm11473-201ENSMUST00000118980 359 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm7539-201ENSMUST00000189789 630 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms