Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm21778-201ENSMUST00000178779 471 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm2383-201ENSMUST00000181461 807 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm29067-201ENSMUST00000190821 470 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm45186-201ENSMUST00000206874 478 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm7985-201ENSMUST00000183329 981 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm2260-201ENSMUST00000184965 657 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm38321-201ENSMUST00000195053 235 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gm32111-201ENSMUST00000207689 846 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.44□□□□□ -0.58
Trim60Q8VI40 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim60Q8VI40 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Spata33-207ENSMUST00000212760 4074 ntBASIC11.43□□□□□ -0.58
Trim60Q8VI40 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim60Q8VI40 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms