Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Ighv5-1-201ENSMUST00000193324 353 ntBASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm7815-201ENSMUST00000196104 832 ntBASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Thoc7-209ENSMUST00000225325 765 ntBASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm37582-201ENSMUST00000192953 1409 ntBASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ddx54Q8K4L0 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Erich3-203ENSMUST00000189969 3460 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm14227-201ENSMUST00000119431 629 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm5274-201ENSMUST00000182641 1003 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Klf10-203ENSMUST00000227920 2144 ntBASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx54Q8K4L0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm15599-201ENSMUST00000122283 1345 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm5071-201ENSMUST00000104922 1035 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm8824-201ENSMUST00000182962 990 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm37944-201ENSMUST00000194233 414 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm42803-201ENSMUST00000201051 451 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm3791-201ENSMUST00000220790 768 ntBASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx54Q8K4L0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.46□□□□□ -0.1
Ddx54Q8K4L0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx54Q8K4L0 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.46□□□□□ -0.1
Ddx54Q8K4L0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx54Q8K4L0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx54Q8K4L0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms