Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm25554-201ENSMUST00000158075 113 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm7255-201ENSMUST00000187371 908 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm38321-201ENSMUST00000195053 235 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm18561-201ENSMUST00000206027 804 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm25580-201ENSMUST00000083409 327 ntBASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim9Q8C7M3 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm9369-201ENSMUST00000196009 733 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm42997-202ENSMUST00000200321 985 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm45770-201ENSMUST00000212105 616 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Gm10179-201ENSMUST00000086233 688 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.17□□□□□ -0.46
Trim9Q8C7M3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim9Q8C7M3 AA474408-201ENSMUST00000098110 3339 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms