Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Snora73b-201ENSMUST00000083419 205 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trub1Q8C0D0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm15197-201ENSMUST00000120526 478 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Mir1896-201ENSMUST00000122641 81 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm25343-201ENSMUST00000157460 107 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trub1Q8C0D0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms